Allelic Variation in a Willow Warbler Genomic Region Is Associated with Climate Clines
Larson, Keith W; Liedvogel, Miriam; Addison, BriAnne; Kleven, Oddmund; Laskemoen, Terje; Lifjeld, Jan Terje; Lundberg, Max; Åkesson, Susanne; Bensch, Staffan
Journal article
Date
2014Metadata
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Original version
Larson KW, Liedvogel M, Addison B, Kleven O, Laskemoen T, et al. (2014) Allelic Variation in a Willow Warbler Genomic Region Is Associated with Climate Clines. PLoS ONE 9(5): e95252 10.1371/journal.pone.0095252Abstract
Local adaptation is an important process contributing to population differentiation which can occur in continuous or
isolated populations connected by various amounts of gene flow. The willow warbler (Phylloscopus trochilus) is one of the
most common songbirds in Fennoscandia. It has a continuous breeding distribution where it is found in all forested habitats
from sea level to the tree line and therefore constitutes an ideal species for the study of locally adapted genes associated
with environmental gradients. Previous studies in this species identified a genetic marker (AFLP-WW1) that showed a steep
north-south cline in central Sweden with one allele associated with coastal lowland habitats and the other with
mountainous habitats. It was further demonstrated that this marker is embedded in a highly differentiated chromosome
region that spans several megabases. In the present study, we sampled 2,355 individuals at 128 sites across all of
Fennoscandia to study the geographic and climatic variables associated with the allele frequency distributions of WW1. Our
results demonstrate that 1) allele frequency patterns significantly differ between mountain and lowland populations, 2)
these allele differences coincide with extreme temperature conditions and the short growing season in the mountains, and
milder conditions in coastal areas, and 3) the northern-allele or ‘‘altitude variant’’ of WW1 occurs in willow warblers that
occupy mountainous habitat regardless of subspecies. Finally these results suggest that climate may exert selection on the
genomic region associated with these alleles and would allow us to develop testable predictions for the distribution of the
genetic marker based on climate change scenarios.